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HX89_02980 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_02980" - NUDIX hydrolase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_02980NUDIX hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)    
Predicted Functional Partners:
HX89_02975
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
              0.487
HX89_02985
Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
              0.469
HX89_01735
Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)
   
          0.427
HX89_02990
Heavy metal transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (70 aa)
 
          0.423
glyQ
Multifunctional fusion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1015 aa)
   
          0.409
HX89_12155
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
   
          0.401
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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