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HX89_03170 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03170" - Dehydratase in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
HX89_03170Dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)    
Predicted Functional Partners:
HX89_03165
Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HpcH/HpaI aldolase family (277 aa)
 
   
  0.911
HX89_03175
Acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (391 aa)
 
   
  0.801
HX89_03205
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
 
   
  0.685
HX89_12455
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HpcH/HpaI aldolase family (281 aa)
 
   
  0.603
HX89_06525
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
   
   
  0.589
HX89_03180
Acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (692 aa)
 
        0.487
HX89_01150
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
 
        0.459
HX89_09390
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (613 aa)
     
   
  0.453
HX89_06155
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
     
   
  0.453
HX89_11155
Acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
   
 
  0.451
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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