STRINGSTRING
HX89_03250 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03250" - Nitrate transporter in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_03250Nitrate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)    
Predicted Functional Partners:
HX89_03270
Nitrite reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family (876 aa)
 
 
  0.988
HX89_03285
Uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
   
  0.885
HX89_12380
Uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
   
   
  0.851
HX89_08145
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1511 aa)
           
  0.729
HX89_03290
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
 
        0.678
moaA
GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family (362 aa)
 
   
  0.545
HX89_02175
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family (691 aa)
         
  0.538
HX89_11385
Molybdopterin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)
 
   
  0.522
HX89_11390
Molybdenum cofactor biosynthesis protein MoaC; Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
 
     
  0.506
HX89_06730
Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)
   
   
  0.480
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (8%) [HD]