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HX89_03330 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03330" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_03330Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)    
Predicted Functional Partners:
HX89_03325
Cold-shock protein; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
              0.887
HX89_06370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (98 aa)
   
          0.695
rbpA
RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (122 aa)
   
          0.692
HX89_09630
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
   
          0.671
HX89_10250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.632
HX89_00705
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
          0.628
HX89_08955
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
   
          0.621
HX89_06140
Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (608 aa)
   
          0.610
HX89_12840
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (107 aa)
   
          0.602
HX89_03320
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (167 aa)
              0.588
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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