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HX89_03530 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03530" - Dehydratase in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HX89_03530Dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)    
Predicted Functional Partners:
HX89_03535
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
   
 
  0.876
HX89_02075
NADPH-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
   
  0.743
HX89_03540
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
 
  0.692
HX89_04375
Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family (262 aa)
 
   
  0.593
HX89_06525
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
   
   
  0.589
HX89_02060
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
 
   
  0.589
HX89_04135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (354 aa)
 
        0.557
HX89_02065
Acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
        0.550
HX89_03545
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (509 aa)
   
   
  0.533
HX89_09390
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (613 aa)
     
   
  0.453
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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