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HX89_03630 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03630" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_03630Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)    
Predicted Functional Partners:
HX89_03635
Acyl dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
 
  0.997
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation (370 aa)
              0.874
HX89_06525
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
 
   
  0.681
HX89_08970
Biotin attachment protein; Derived by automated computational analysis using gene prediction method- Protein Homology (392 aa)
 
   
  0.654
HX89_03625
50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL33 family (56 aa)
   
        0.613
HX89_09840
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
   
          0.606
HX89_07520
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (441 aa)
   
        0.595
HX89_06095
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown; Belongs to the cytochrome c oxidase bacterial subunit CtaF family (133 aa)
   
          0.531
HX89_06115
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
   
        0.516
HX89_06120
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
   
          0.455
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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