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HX89_03930 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03930" - ArsR family transcriptional regulator in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
HX89_03930ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)    
Predicted Functional Partners:
HX89_10230
Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
   
     
  0.632
HX89_11880
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
   
          0.610
HX89_12415
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
   
          0.601
HX89_10885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
   
          0.574
HX89_01735
Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)
   
          0.572
HX89_12780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
 
          0.569
HX89_08240
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (157 aa)
   
          0.554
HX89_11375
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
   
          0.534
HX89_06175
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
   
     
  0.530
HX89_12220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
   
          0.519
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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