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HX89_03970 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_03970" - ABC transporter substrate-binding protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HX89_03970ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)    
Predicted Functional Partners:
HX89_03980
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
 
  0.984
HX89_03975
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)
 
 
  0.968
HX89_03985
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (422 aa)
 
 
  0.954
HX89_05395
Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
 
  0.706
HX89_08675
Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
 
  0.642
HX89_05385
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (358 aa)
 
 
  0.587
HX89_11725
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (356 aa)
 
 
  0.579
HX89_08680
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
 
 
  0.548
HX89_02765
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
   
 
  0.476
HX89_03965
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (577 aa)
              0.454
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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