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HX89_04105 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04105" - Ribonuclease in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
HX89_04105Ribonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
           
  0.596
HX89_10345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
   
          0.555
HX89_04100
Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (449 aa)
              0.473
HX89_03345
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (78 aa)
     
 
  0.468
HX89_13095
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (97 aa)
     
      0.442
HX89_10315
Peptide chain release factor 2; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)
 
          0.405
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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