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HX89_04325 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04325" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04325Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)    
Predicted Functional Partners:
HX89_04330
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
              0.668
HX89_12445
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
   
        0.563
HX89_00405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
   
        0.479
HX89_11760
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (454 aa)
   
          0.432
HX89_03105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (93 aa)
   
          0.429
HX89_06345
Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (539 aa)
   
        0.423
HX89_03235
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
   
   
  0.412
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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