STRINGSTRING
HX89_04425 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04425" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04425Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)    
Predicted Functional Partners:
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
         
  0.549
HX89_01760
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
 
     
  0.545
HX89_00435
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
         
  0.542
HX89_00255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)
         
  0.542
HX89_00370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
     
0.513
HX89_06445
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
     
  0.510
glyQ
Multifunctional fusion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1015 aa)
              0.482
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (680 aa)
              0.481
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
              0.467
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (701 aa)
              0.448
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (9%) [HD]