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HX89_04525 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04525" - DNA helicase in Dermacoccus nishinomiyaensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HX89_04525DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (708 aa)    
Predicted Functional Partners:
HX89_04510
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily (1176 aa)
 
 
 
0.895
HX89_10855
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (898 aa)
   
 
0.873
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
   
 
  0.776
HX89_04520
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
   
        0.732
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (701 aa)
 
 
  0.676
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
   
 
  0.650
HX89_13685
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method- Protein Homology (899 aa)
 
 
  0.608
priA
Probable primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (810 aa)
 
 
  0.602
HX89_13530
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
 
 
  0.585
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1298 aa)
   
 
  0.568
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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