STRINGSTRING
HX89_04565 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04565" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04565Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)    
Predicted Functional Partners:
HX89_04560
Endopeptidase La; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S16 family (365 aa)
              0.874
HX89_04555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (575 aa)
 
          0.716
HX89_01745
Topoisomerase II; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.524
HX89_00725
Nuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
   
          0.463
HX89_10235
Tetraacyldisaccharide 4’-kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (75 aa)
   
          0.450
HX89_11375
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
   
          0.449
HX89_12725
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (517 aa)
   
          0.443
HX89_12780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
          0.435
HX89_04550
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
              0.418
HX89_11070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.414
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (8%) [HD]