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HX89_04595 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04595" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04595Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (859 aa)    
Predicted Functional Partners:
HX89_13635
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
 
   
  0.835
HX89_00125
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
 
     
  0.699
HX89_04600
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
     
0.616
HX89_02780
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1391 aa)
   
   
  0.599
HX89_07940
Magnesium chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (714 aa)
   
        0.588
HX89_07915
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the precorrin methyltransferase family (525 aa)
              0.585
HX89_01470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
         
  0.546
HX89_08145
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1511 aa)
              0.539
HX89_12380
Uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
         
  0.535
HX89_01870
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (403 aa)
   
   
  0.532
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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