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HX89_04600 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04600" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04600Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)    
Predicted Functional Partners:
HX89_00790
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
   
          0.732
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
 
 
  0.698
kgd
Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method- Protein Homology (1278 aa)
       
 
  0.618
HX89_04595
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (859 aa)
 
     
0.616
HX89_00785
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
 
 
  0.560
HX89_00585
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (538 aa)
   
 
 
  0.537
HX89_00770
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (634 aa)
 
 
  0.496
HX89_00780
Cell division protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (459 aa)
 
     
  0.471
HX89_06025
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (561 aa)
 
 
  0.462
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (269 aa)
   
          0.450
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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