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HX89_04650 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04650" - Anti-sigma factor in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
HX89_04650Anti-sigma factor; Derived by automated computational analysis using gene prediction method- Protein Homology (84 aa)    
Predicted Functional Partners:
HX89_04645
RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (267 aa)
     
 
  0.914
HX89_07725
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
   
          0.607
HX89_06330
Phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
          0.590
HX89_04635
Putative SOS response-associated peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SOS response-associated peptidase family (281 aa)
              0.576
HX89_04640
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
              0.575
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
              0.543
HX89_07515
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (66 aa)
   
          0.498
HX89_10965
RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (194 aa)
     
 
  0.471
HX89_04390
RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (227 aa)
     
 
  0.471
HX89_02555
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (211 aa)
     
 
  0.471
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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