STRINGSTRING
HX89_04700 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04700" - dTDP-glucose 4,6-dehydratase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04700dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (344 aa)    
Predicted Functional Partners:
HX89_04695
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (297 aa)
 
  0.997
HX89_04690
dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
 
  0.997
HX89_10735
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
 
0.837
HX89_07990
Epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
   
 
0.820
ctc
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (225 aa)
         
  0.574
HX89_10675
Acetylneuraminic acid synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (760 aa)
         
  0.571
grpE
Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- dependent [...] (209 aa)
         
  0.567
HX89_10355
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DegT/DnrJ/EryC1 family (376 aa)
 
   
  0.510
HX89_10380
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
     
  0.508
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
              0.503
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (12%) [HD]