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nucS protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"nucS" - Endonuclease NucS in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nucSEndonuclease NucS; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (231 aa)    
Predicted Functional Partners:
HX89_04885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
              0.845
HX89_10085
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
   
        0.773
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
          0.749
HX89_07775
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method- Protein Homology (80 aa)
   
          0.738
HX89_04890
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
              0.723
HX89_10270
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (90 aa)
   
          0.713
HX89_04555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (575 aa)
   
        0.701
HX89_07070
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
   
          0.696
rbpA
RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (122 aa)
   
          0.687
HX89_06370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (98 aa)
   
          0.671
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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