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HX89_04885 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04885" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04885Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)    
Predicted Functional Partners:
nucS
Endonuclease NucS; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (231 aa)
              0.845
HX89_02100
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
   
          0.695
HX89_12900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
   
          0.693
HX89_04890
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
              0.614
HX89_04895
ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
              0.611
HX89_00035
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (184 aa)
   
          0.605
AIF39654.1
Derived by automated computational analysis using gene prediction method- Protein Homology (184 aa)
   
          0.605
HX89_00540
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
   
          0.571
HX89_07145
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
 
   
  0.548
HX89_06605
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
          0.512
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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