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HX89_04895 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_04895" - ATP/GTP-binding protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_04895ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)    
Predicted Functional Partners:
HX89_04890
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
              0.845
HX89_04885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
              0.611
nucS
Endonuclease NucS; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (231 aa)
              0.611
HX89_05845
Proteasome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
   
          0.526
HX89_06775
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
   
          0.478
HX89_05055
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
   
          0.439
HX89_10250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.434
HX89_04505
UvrD/REP helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1117 aa)
   
          0.424
HX89_06780
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
   
          0.422
HX89_03370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (753 aa)
   
          0.413
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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