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HX89_05270 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05270" - ABC transporter in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05270ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (571 aa)    
Predicted Functional Partners:
HX89_05275
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (538 aa)
 
       
0.838
HX89_06330
Phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
          0.611
HX89_06875
Histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (449 aa)
 
        0.519
HX89_05285
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (560 aa)
   
        0.487
HX89_05265
Peroxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (423 aa)
              0.477
HX89_11730
Lipopolysaccharide kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (412 aa)
 
 
      0.455
HX89_09235
Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
   
          0.427
HX89_09520
Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
          0.424
HX89_10425
Guanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
   
      0.420
HX89_03265
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (88 aa)
   
          0.416
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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