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HX89_05560 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05560" - (4Fe-4S) protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05560(4Fe-4S) protein; Derived by automated computational analysis using gene prediction method- Protein Homology (546 aa)    
Predicted Functional Partners:
HX89_05555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
 
  0.999
HX89_05565
Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
  0.998
HX89_04320
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (958 aa)
   
 
  0.851
HX89_10475
L-lactate permease; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
 
   
  0.823
HX89_05570
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
 
     
  0.754
gltA
Citrate synthase; Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the citrate [...] (421 aa)
     
        0.632
HX89_08145
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1511 aa)
   
        0.604
HX89_02225
Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (781 aa)
   
 
  0.514
HX89_02175
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family (691 aa)
   
   
  0.466
HX89_12970
Sodium-solute symporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (544 aa)
   
        0.420
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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