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HX89_05565 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05565" - Fe-S osidoreductase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05565Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)    
Predicted Functional Partners:
HX89_05560
(4Fe-4S) protein; Derived by automated computational analysis using gene prediction method- Protein Homology (546 aa)
 
  0.998
HX89_05555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
  0.987
HX89_10615
Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family (246 aa)
 
 
  0.783
HX89_05570
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
   
   
  0.742
HX89_10475
L-lactate permease; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
 
   
  0.641
HX89_12975
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (451 aa)
 
   
  0.616
HX89_07610
Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (423 aa)
              0.418
HX89_03760
Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)
     
      0.409
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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