STRINGSTRING
HX89_05660 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05660" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05660Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (528 aa)    
Predicted Functional Partners:
HX89_10710
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
   
          0.653
HX89_12575
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)
   
        0.615
HX89_12105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
   
        0.612
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily (495 aa)
   
        0.598
HX89_11070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.558
HX89_04950
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (569 aa)
   
 
  0.550
HX89_10885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
 
          0.532
HX89_08715
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
 
  0.524
HX89_05335
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
   
 
  0.517
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (215 aa)
   
 
  0.515
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (15%) [HD]