STRINGSTRING
HX89_05775 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05775" - Competence protein ComEA in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05775Competence protein ComEA; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)    
Predicted Functional Partners:
HX89_06120
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
       
 
  0.963
HX89_07940
Magnesium chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (714 aa)
           
  0.684
nadD
Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (195 aa)
 
        0.621
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
 
          0.582
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
         
  0.552
HX89_00770
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (634 aa)
   
          0.485
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (124 aa)
 
        0.460
HX89_00785
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
   
          0.431
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
              0.422
HX89_07935
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
   
   
  0.422
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (8%) [HD]