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HX89_05865 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05865" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05865Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (120 aa)    
Predicted Functional Partners:
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine (408 aa)
   
        0.640
HX89_06240
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (166 aa)
   
          0.486
sigA
RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (550 aa)
         
  0.469
HX89_06265
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
   
          0.466
HX89_07515
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (66 aa)
   
          0.452
HX89_11625
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
     
 
  0.446
HX89_10975
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (537 aa)
     
 
  0.446
HX89_10120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
   
          0.445
HX89_05155
3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
   
          0.412
HX89_06270
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (171 aa)
   
          0.404
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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