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HX89_06205 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06205" - Transcriptional regulator in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06205Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)    
Predicted Functional Partners:
HX89_06005
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
   
        0.622
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
         
  0.556
HX89_06095
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown; Belongs to the cytochrome c oxidase bacterial subunit CtaF family (133 aa)
   
          0.540
HX89_08715
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
          0.534
HX89_05755
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
   
        0.533
HX89_02140
Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (726 aa)
   
          0.509
HX89_04505
UvrD/REP helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1117 aa)
   
          0.500
HX89_06115
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
   
        0.498
HX89_04510
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily (1176 aa)
   
          0.494
HX89_10170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (596 aa)
   
        0.432
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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