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HX89_06460 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06460" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06460Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)    
Predicted Functional Partners:
HX89_08340
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.678
HX89_10885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
   
          0.643
HX89_11845
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
   
          0.596
HX89_06225
DNA-directed DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DNA polymerase type-C family. DnaE2 subfamily (1248 aa)
   
          0.567
HX89_12780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
          0.525
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (678 aa)
              0.524
HX89_04795
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)
   
          0.506
HX89_10170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (596 aa)
   
          0.494
HX89_06470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
              0.474
HX89_01750
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (715 aa)
   
          0.469
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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