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HX89_06540 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06540" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06540Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)    
Predicted Functional Partners:
HX89_06535
3’-5’ exonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
              0.887
HX89_07070
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
   
          0.719
HX89_09175
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
   
        0.712
HX89_06525
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
              0.685
HX89_10245
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
   
          0.677
HX89_00685
RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
          0.588
HX89_10985
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (419 aa)
   
          0.576
HX89_08995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
   
          0.575
HX89_09930
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (590 aa)
   
        0.559
HX89_10270
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (90 aa)
   
          0.535
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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