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HX89_06885 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06885" - Chromosome partitioning protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06885Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)    
Predicted Functional Partners:
HX89_06890
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (318 aa)
 
   
  0.941
HX89_00620
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ParB family (413 aa)
 
  0.894
HX89_06880
Tyrosine recombinase XerC; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family. XerC subfamily (298 aa)
 
   
  0.754
HX89_14285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ParB family (482 aa)
 
 
  0.705
HX89_06895
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (207 aa)
   
   
  0.690
HX89_06900
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pseudouridine synthase RsuA family (303 aa)
   
        0.684
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the cytidylate kinase family. Type 1 subfamily (231 aa)
   
        0.676
HX89_06905
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
              0.675
ribA
Multifunctional fusion protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (411 aa)
         
  0.582
HX89_06875
Histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (449 aa)
              0.503
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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