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HX89_07055 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_07055" - Signal peptide protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_07055Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (148 aa)    
Predicted Functional Partners:
HX89_07060
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
        0.911
kgd
Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method- Protein Homology (1278 aa)
       
 
  0.802
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
 
 
  0.758
HX89_00780
Cell division protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (459 aa)
 
     
  0.688
HX89_07065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (147 aa)
              0.685
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (129 aa)
   
        0.666
HX89_00785
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
 
 
  0.657
HX89_11955
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (870 aa)
   
          0.627
HX89_05280
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (168 aa)
   
        0.626
HX89_07070
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
 
          0.602
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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