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HX89_07325 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_07325" - RNA helicase in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_07325RNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (929 aa)    
Predicted Functional Partners:
HX89_10935
Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (373 aa)
   
      0.754
HX89_06535
3’-5’ exonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
   
 
  0.739
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (274 aa)
   
        0.727
HX89_07355
Peptidyl-prolyl cis-trans isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
 
      0.717
HX89_07360
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
 
      0.708
HX89_07395
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
 
 
  0.690
HX89_11560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (857 aa)
   
      0.580
HX89_10270
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (90 aa)
   
          0.574
rpsA
30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (499 aa)
     
 
  0.571
HX89_05330
Derived by automated computational analysis using gene prediction method- Protein Homology (861 aa)
   
      0.565
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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