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HX89_07990 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_07990" - Epimerase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_07990Epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)    
Predicted Functional Partners:
HX89_04690
dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
 
  0.930
HX89_04695
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (297 aa)
     
  0.913
HX89_07995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
              0.848
HX89_10735
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
   
   
 
0.842
HX89_04700
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (344 aa)
   
 
0.820
HX89_10765
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (447 aa)
 
  0.794
HX89_08005
Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
   
  0.539
HX89_10675
Acetylneuraminic acid synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (760 aa)
   
   
  0.533
HX89_02050
UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family (339 aa)
 
 
0.442
HX89_08050
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
 
  0.441
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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