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HX89_08080 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_08080" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_08080Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (504 aa)    
Predicted Functional Partners:
HX89_08075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (155 aa)
            0.915
HX89_08085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (621 aa)
 
       
0.787
HX89_08070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
         
  0.542
HX89_08015
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
   
          0.541
HX89_08095
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (196 aa)
              0.463
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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