STRINGSTRING
pyrR protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"pyrR" - Bifunctional protein PyrR in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrRBifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (208 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ATCase/OTCase family (313 aa)
 
 
  0.987
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily (434 aa)
 
 
  0.975
HX89_08330
Orotidine 5’-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily (294 aa)
   
 
  0.966
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (243 aa)
   
 
  0.924
carB
Carbamoyl-phosphate synthase large chain; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method- Protein Homology (1102 aa)
   
   
  0.921
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the cytidylate kinase family. Type 1 subfamily (231 aa)
         
  0.916
carA
Carbamoyl-phosphate synthase small chain; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CarA family (399 aa)
   
   
  0.913
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (216 aa)
     
 
  0.909
HX89_10540
Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
     
 
  0.905
HX89_10520
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (278 aa)
     
 
    0.902
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (7%) [HD]