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HX89_08430 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_08430" - Peptide ABC transporter ATP-binding protein in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HX89_08430Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (697 aa)    
Predicted Functional Partners:
HX89_08425
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (558 aa)
 
  0.995
HX89_08440
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
  0.993
HX89_08435
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
  0.992
HX89_08465
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
  0.974
HX89_08475
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
  0.968
HX89_08470
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (573 aa)
 
  0.919
HX89_08460
Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (435 aa)
 
 
0.855
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (904 aa)
              0.500
HX89_08415
Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (170 aa)
              0.444
HX89_12380
Uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
         
  0.436
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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