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HX89_08690 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_08690" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_08690Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)    
Predicted Functional Partners:
HX89_08685
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
          0.856
HX89_08675
Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
          0.788
HX89_08670
Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannitol dehydrogenase family (502 aa)
 
     
  0.776
HX89_08680
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
 
          0.717
HX89_08660
Xylulose kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (470 aa)
 
   
  0.667
HX89_08665
Sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
     
  0.651
HX89_08695
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (466 aa)
              0.549
kgd
Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method- Protein Homology (1278 aa)
         
  0.545
HX89_00525
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
 
   
  0.437
HX89_02540
Glycerol transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family (241 aa)
 
     
  0.429
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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