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HX89_08950 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_08950" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_08950Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)    
Predicted Functional Partners:
HX89_08955
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
              0.809
HX89_07940
Magnesium chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (714 aa)
     
        0.754
HX89_08935
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
        0.692
HX89_01225
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
 
 
0.684
HX89_08930
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
 
          0.679
rpmI
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL35 family (64 aa)
   
        0.678
HX89_06030
Epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
   
        0.664
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (71 aa)
     
        0.619
HX89_08960
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (920 aa)
   
        0.558
HX89_08925
Ribonuclease HI; Derived by automated computational analysis using gene prediction method- Protein Homology (414 aa)
 
        0.484
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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