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HX89_09095 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_09095" - Metal ABC transporter in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
HX89_09095Metal ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)    
Predicted Functional Partners:
HX89_09085
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family (313 aa)
 
  0.996
HX89_09090
Zinc ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
  0.996
HX89_09100
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family (148 aa)
         
  0.842
ribA
Multifunctional fusion protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (411 aa)
   
   
  0.666
HX89_09620
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
        0.563
HX89_11535
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
         
  0.557
HX89_09075
tRNA-dihydrouridine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)
   
        0.545
HX89_09080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
              0.544
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
              0.483
HX89_03035
Patatin; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
        0.417
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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