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HX89_09390 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_09390" - AMP-dependent synthetase in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
HX89_09390AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (613 aa)    
Predicted Functional Partners:
HX89_03545
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (509 aa)
 
 
0.732
HX89_06435
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (499 aa)
 
 
0.725
HX89_01300
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (496 aa)
 
 
0.721
HX89_02875
Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method- Protein Homology (564 aa)
 
 
0.718
HX89_09400
Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family (316 aa)
   
        0.668
HX89_06155
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
   
   
 
0.663
HX89_09395
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (376 aa)
              0.649
HX89_09405
Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family (366 aa)
              0.558
HX89_06525
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
   
   
  0.521
HX89_09065
Sulfurtransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)
     
        0.477
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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