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HX89_09610 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_09610" - Tyrosine recombinase XerC in Dermacoccus nishinomiyaensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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HX89_09610Tyrosine recombinase XerC; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family. XerC subfamily (351 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
 
   
  0.680
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
   
   
  0.638
ruvB
Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (364 aa)
 
   
  0.477
HX89_00620
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ParB family (413 aa)
   
   
  0.456
HX89_14290
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
   
  0.440
HX89_08525
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (583 aa)
 
 
  0.421
HX89_06885
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
 
   
  0.418
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family (479 aa)
 
   
  0.414
mfd
Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1209 aa)
   
 
 
  0.401
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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