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HX89_09905 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_09905" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_09905Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (106 aa)
 
        0.876
gltX
Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily (520 aa)
              0.740
HX89_05450
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
   
          0.668
HX89_09920
Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)
   
        0.657
HX89_09915
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (443 aa)
              0.652
HX89_11790
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
   
          0.592
HX89_10120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
   
          0.571
HX89_08715
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
          0.565
HX89_06330
Phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
          0.557
HX89_10130
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
   
          0.545
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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