STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF41214.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)    
Predicted Functional Partners:
AIF40345.1
tRNA synthetase RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.682
AIF40715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
AIF41130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
AIF39745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AIF40637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
AIF40479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
AIF41215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
AIF41259.1
Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
AIF41842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
AIF41264.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, LMG:14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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