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HX89_10175 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_10175" - Histidine kinase in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
HX89_10175Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (598 aa)    
Predicted Functional Partners:
HX89_10180
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
  0.998
HX89_10170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (596 aa)
   
  0.951
HX89_11795
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
  0.750
HX89_11580
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
  0.683
HX89_12860
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.683
HX89_02825
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
  0.653
HX89_01695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
  0.602
HX89_02520
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
 
  0.600
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (501 aa)
           
  0.563
HX89_11890
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
 
  0.522
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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