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HX89_10230 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_10230" - Phosphosugar isomerase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_10230Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)    
Predicted Functional Partners:
HX89_10245
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
   
   
  0.741
HX89_10885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
   
          0.739
HX89_12780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
 
          0.725
manB
Phosphomannomutase; Converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; Derived by automated computational analysis using gene prediction method- Protein Homology (486 aa)
   
        0.688
HX89_00405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
   
        0.659
HX89_10250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
 
        0.652
HX89_03930
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
   
     
  0.632
HX89_10235
Tetraacyldisaccharide 4’-kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (75 aa)
              0.582
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily (240 aa)
         
  0.570
HX89_05965
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
   
          0.565
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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