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HX89_10245 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_10245" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_10245Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)    
Predicted Functional Partners:
manB
Phosphomannomutase; Converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; Derived by automated computational analysis using gene prediction method- Protein Homology (486 aa)
   
        0.890
HX89_10235
Tetraacyldisaccharide 4’-kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (75 aa)
              0.856
HX89_10250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
 
        0.803
HX89_10230
Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
   
   
  0.741
HX89_06540
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
   
          0.677
HX89_08995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
   
          0.586
HX89_10270
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (90 aa)
 
   
  0.581
HX89_12515
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.575
HX89_07070
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
   
        0.563
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (106 aa)
   
          0.511
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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