STRINGSTRING
HX89_10895 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_10895" - Mur ligase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_10895Mur ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)    
Predicted Functional Partners:
HX89_10890
Cobalamin biosynthesis protein CobB; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
     
  0.992
HX89_07620
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the MurCDEF family (943 aa)
 
 
  0.638
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
           
  0.560
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
 
     
  0.541
HX89_07625
Mur ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
 
 
  0.502
HX89_00790
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
 
        0.482
HX89_00780
Cell division protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (459 aa)
 
 
  0.457
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily (366 aa)
   
   
  0.440
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan (501 aa)
   
 
  0.435
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA); Belongs to the MurCDEF family (501 aa)
   
   
0.403
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (6%) [HD]