STRINGSTRING
msrA protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"msrA" - Peptide methionine sulfoxide reductase MsrA in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (215 aa)    
Predicted Functional Partners:
HX89_06600
Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (136 aa)
 
  0.993
tyrS
Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily (420 aa)
            0.795
HX89_08595
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (310 aa)
   
      0.777
HX89_12370
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (206 aa)
   
   
  0.666
HX89_07620
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the MurCDEF family (943 aa)
         
  0.666
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
   
   
  0.599
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (97 aa)
       
 
  0.593
HX89_11085
Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
   
 
  0.584
HX89_11100
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
              0.573
HX89_04950
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (569 aa)
   
   
  0.566
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (6%) [HD]