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HX89_11460 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_11460" - Endonuclease in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_11460Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
   
 
  0.732
HX89_06140
Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (608 aa)
   
   
  0.697
HX89_13635
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
   
          0.476
HX89_11450
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
              0.463
HX89_02440
Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
   
          0.452
HX89_11455
Allantoin permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family (520 aa)
              0.446
HX89_10760
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
     
 
  0.441
HX89_03235
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
     
 
  0.441
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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