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HX89_11655 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_11655" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_11655Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (346 aa)    
Predicted Functional Partners:
HX89_11650
Molybdate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
   
  0.970
HX89_11645
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
     
  0.930
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (422 aa)
 
      0.622
HX89_11710
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
 
 
  0.600
cysS
Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family (483 aa)
          0.579
HX89_11720
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (445 aa)
   
 
  0.574
HX89_03980
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
  0.539
HX89_05395
Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
  0.536
HX89_03975
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)
 
  0.536
HX89_11715
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (529 aa)
 
 
  0.533
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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